{"id":931,"date":"2011-11-03T18:48:09","date_gmt":"2011-11-04T01:48:09","guid":{"rendered":"http:\/\/miriamposner.com\/blog\/?p=931"},"modified":"2011-11-03T19:00:42","modified_gmt":"2011-11-04T02:00:42","slug":"customize-your-network-visualization","status":"publish","type":"post","link":"https:\/\/miriamposner.com\/blog\/customize-your-network-visualization\/","title":{"rendered":"Customize your network visualization"},"content":{"rendered":"

\"\"<\/a>In my last post<\/a>, I explained how you can visualize a network of film personnel (really, any kind of network) using Cytoscape. When I left off, we’d created a network visualization, but it didn’t look exactly terrific. Here’s how you can customize the look of your network visualization so that you can see what you need to see.<\/p>\n

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Let’s assume you’re starting with the default network view.<\/p>\n

<\/p>\n<\/div>\n

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Switch to the VizMapper pane<\/span><\/h2>\n
\"media_1320277164769.png\"<\/div>\n
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Click on the right-facing arrow next to the word Network<\/strong> to bring it up.<\/p>\n<\/div>\n<\/div>\n

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Click on the source-target diagram<\/span><\/h2>\n
\"media_1320277248692.png\"<\/div>\n
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This will bring up the appearance pane.<\/p>\n<\/div>\n<\/div>\n

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Start playing with properties<\/span><\/h2>\n
\"media_1320277338062.png\"<\/div>\n
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Start by clicking on Node_Fill_Color<\/strong>. As you’ll see, you can customize lots of aspects of your diagram. By clicking to the Edge and Global panes, you can also change many characteristics of edges and overall colors.<\/p>\n<\/div>\n<\/div>\n

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Looks pretty good!<\/span><\/h2>\n
\"media_1320277731997.png\"<\/div>\n
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Much easier to see! But at a glance, it’s hard to distinguish films from people. Let’s look at ways we can distinguish among the kinds of data we have.<\/p>\n<\/div>\n<\/div>\n

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Create a node attributes file<\/span><\/h2>\n
\"media_1320370130204.png\"<\/div>\n
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Unfortunately, this is a little harder than it should be in Cytoscape.You have to create something called a node attribute file in order to tell Cytoscape to divide your nodes into two types: source nodes and target nodes.<\/p>\n

So head back to your original network spreadsheet and save it as something new. Delete your middle column — the one that has all the relationships in it. Then cut the entire contents of column B — the one with the film titles in it \u2014 and paste them into column A, below the names. The idea is to have one long column. Finally, in column B, type the word source<\/strong> for every person and target<\/strong> for every film. Label column A node_id<\/strong> and column B node_type<\/strong>.<\/p>\n

You’re welcome to use my spreadsheet<\/a> as an example.<\/p>\n<\/div>\n<\/div>\n

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Import your node attributes<\/span><\/h2>\n
\"media_1320278490174.png\"<\/div>\n
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Go to File<\/strong>, Import<\/strong>, and then Attribute from Table (Text\/MS Excel)… <\/strong>Select your file and click Import<\/strong>.<\/p>\n<\/div>\n<\/div>\n

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Change the settings for individual attributes<\/span><\/h2>\n
\"media_1320370602368.png\"<\/div>\n
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In the list of attributes under the words Visual Mapping Browser<\/strong>, click on Node Color<\/strong>. In the column on the right of Node Color, hoose node_type<\/strong>. Then, for Mapping Type<\/strong>, choose Discrete Mapping<\/strong>. Now you can specify different colors for the source<\/strong> nodes (the actors) and the target<\/strong> nodes (the films) by clicking on the ellipses (…<\/strong>) button.<\/p>\n<\/div>\n<\/div>\n

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Repeat until you’re happy!<\/span><\/h2>\n
\"media_1320370956150.png\"<\/div>\n
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You can repeat this process for lots of different variables, like Node Opacity<\/strong> and Node Size <\/strong>(use numbers for each of these values). Play around and see what you like! There’s no right way for your visualization to look. The idea is to explore your data and then present its interesting features as legibly as you can.<\/p>\n<\/div>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

In my last post, I explained how you can visualize a network of film personnel (really, any kind of network) using Cytoscape. When I left off, we’d created a network visualization, but it didn’t look exactly terrific. Here’s how you can customize the look of your network visualization so that you can see what you […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[5],"tags":[],"class_list":["post-931","post","type-post","status-publish","format-standard","hentry","category-tools"],"_links":{"self":[{"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/posts\/931","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/comments?post=931"}],"version-history":[{"count":8,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/posts\/931\/revisions"}],"predecessor-version":[{"id":942,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/posts\/931\/revisions\/942"}],"wp:attachment":[{"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/media?parent=931"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/categories?post=931"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/miriamposner.com\/blog\/wp-json\/wp\/v2\/tags?post=931"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}